FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007700026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007700026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107427797
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG3591340.3343026758707525TruSeq Adapter, Index 7 (97% over 34bp)
GGCGTACGGAAGACCCGCTCCCCGGCGCCGCTCGTGGGGGGCCCAAGTCC1130890.1052697748237358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)