Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007700085 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 86927317 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCTC | 722525 | 0.8311829065194777 | Illumina Single End PCR Primer 1 (96% over 31bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCT | 222349 | 0.25578725730140733 | Illumina Single End PCR Primer 1 (96% over 32bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 171534 | 0.19733037429419337 | No Hit |
AGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACC | 92901 | 0.10687204345671912 | No Hit |
AGTATGGCCCGGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTA | 91086 | 0.10478409220889677 | No Hit |