FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007701383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007701383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87692
Sequences flagged as poor quality0
Sequence length246-251
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG905410.32477306937919No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA66867.624412717237604No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAATGTCAGTTACAGGTTAGTA53556.1066003740364No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTTGTCCAGGG32773.7369429366418827No Hit
CCCGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGAA30013.422204990192948No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTAACAGTCTAGTG25392.8953610363545135No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACTGTCCAGTA21622.4654472471833238No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACAGTCCAGCA20822.37421885690827No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTGACAGTCTAGTG16801.9157961957761256No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTATCGTCCAGTA15981.8222870957441955No Hit
CCCGTTCGCTACCCTGGCTTTCGCATCTCAGCGTCAGACACAGTCCAGAA14981.7082516079003784No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTCATCGTCCAGCA12621.4391278565889705No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTCATCGTCCAGTA12501.4254435980477125No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAATGTCAGTGGCAGTTTAGTA12181.388952241937691No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTCATCGTCCAGAA9641.0993021028143959No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACCGTCCAGTA9051.0320211649865438No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTTGCAGTCCAGTG6510.7423710258632487No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTGAGCGTCAGTTATGTCCCAGGA6070.6921954112119691No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAGTGTCAGTAACAGTCCAGCA5960.6796515075491493No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTTACAGGTTAGTA5860.6682479587647676No Hit
CCTGTTTGCTACCCACGCTTTCGCACCTCAGCGTCAGTTACCGTCCAGGT5540.6317566026547461No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTAATCGTCCAGTA5490.6260548282625553No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAATGTCAGTTACAGGTTAGTA4440.5063175660265474No Hit
CCTGTTCGATACCCACGCTTTCGTGCCTCAGCGTCTGTTTCACCCTAGCA3750.4276330794143138No Hit
CCTGTTTGCTCTCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG3740.4264927245358756No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCGACGTCAGTTACCGTCCAGTA2900.33070291474706925No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTATCGTCCAGTA2850.3250011403548784No Hit
CCTGTTTGCTCCCCACGCTTGCGCACCTGAGCGTCAGTCTTCGTCCAGGG2800.3192993659626876No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACTGTCCAGTA2790.31815901108424943No Hit
CCTGTTCGATCCCCACGCTTTCGTGCATCAGCGTCAGTCATGGCTTGGCA2640.3010536879076769No Hit
CCTGTTTGCTCTCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA2580.29421155863704784No Hit
CCTGTTTGATACCCACACTTGCGAGCATCAATGTCAGTTACAGGTTAGTA2530.288509784244857No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGTGTCAGTAACAGTCTAGTG2320.2645623317976554No Hit
CCTGTTTGCTCCCCACGCTTGCGAGCCTCAACGTCAGTTACCGTCCAGTA2310.26342197691921726No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGCGTCAGTTACAGTCCAGCA2290.26114126716234093No Hit
CCTGTTTGATATCCACACTTTCGAGCATCAATGTCAGTTACAGGTTAGTA2130.2428955891073302No Hit
CCTGTTCGCTCCCCCAGCTTTCGCGCCTCAGCGTCGGTCTCGGCCCAGAG1870.2132463622679378No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGTGTCAGTTACAGGTTAGTA1860.2121060073894996No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGCGTCAGTTACAGTCCAGTA1700.19386032933448888No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTGGCAGTTTAGTA1620.18473749030698355No Hit
CCTGTTTGATACCCACACTTGCGAGCATCAGTGTCAGTAACAGTCTAGTG1620.18473749030698355No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTCATCGTCCAGCA1610.18359713542854536No Hit
CCTGTTCGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG1580.18017607079323086No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGT1560.1778953610363545No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTCATCGTCCAGTA1530.17447429640104No Hit
CCCGTTTGCTCTCCTGGCTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGAA1520.17333394152260181No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAGTGTCAGTGACAGTCTAGTG1510.17219358664416368No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTAATGTCCAGCA1500.17105323176572548No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGTGTCAGTTACAGTCCAGCA1430.1630707476166583No Hit
CCTGTTTGCTCTCCACGCTTTCGCACCTGAGCGTCAGTCTTTGTCCAGGG1430.1630707476166583No Hit
CCTGTTTGATCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGG1390.15850932810290563No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCTAGGG1280.14596542444008576No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGTTACTGTCCAGCA1260.14368471468320942No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAATGTCAGTTACATGTTAGTA1250.14254435980477126No Hit
CCTGTTTGCTCCCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGTG1250.14254435980477126No Hit
CCTGTTTGATATCCACACTTTCGAGCATCAGTGTCAGTAACAGTCTAGTG1240.14140400492633307No Hit
CCTGTTTGCTCCCCACGCTTGCGCACCTGAGCGTCAGTCTTTGTCCAGGG1220.13912329516945673No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAG1190.13570223053414224No Hit
CCTGTTTGATACCCACACTTGCGAGCATCAGTGTCAGTGACAGTCTAGTG1180.13456187565570404No Hit
CCTGTTTGCTCCCCTGGCTTTCGCGCCTCAGCGTCAGTTGTCGTCCAGAA1080.12315832687132236No Hit
CCTGTTTGCTCCCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCA1060.12087761711444601No Hit
CCTGTTTGATATCCACACTTTCGAGCATCAGCGTCAGTTACAGTCCAGCA1060.12087761711444601No Hit
CCTGTTTGATACCCACACTTTCGAGCATCAGTGTCAGTATCAGTCTAGTG1050.11973726223600785No Hit
CCTGTTTGATCCCCACGCTTTCGTGCATCAGCGTCAGTCATGGCTTGGCA1050.11973726223600785No Hit
CCTGTTTGCTCCCCACGCTTTCGAGCCTCAGCGTCAGTCATCGTCCAGAA1030.1174565524791315No Hit
CCTGTTTGCTCTCCACGCTTTCGAGCCTCAACGTCAGTTACTGTCCAGTA1000.114035487843817No Hit
CCTGTTTGATCCCCACGCTTTCGAGCCTCAACGTCAGTTACCGTCCAGTA930.1060530036947498No Hit
CCTGTTTGCTCCCCACGCTTTCGTGCCTCAACGTCAGATATAGTTTGGTA900.1026319390594353No Hit
CCTGTTTGATACCCACACTTTCGAGCCTCAATGTCAGTGGCAGTTTAGTA900.1026319390594353No Hit

[OK]Adapter Content

Adapter graph