FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007710646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007710646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477576511
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG19501460.4083421096059726TruSeq Adapter, Index 7 (97% over 34bp)
ACGTTCTGTCGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT18167730.38041506610026726No Hit
ACGTTCTGTCGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA10807330.2262952584784891No Hit
ACGTTCTGTCGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6471630.13550980525505785No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)