FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007710648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007710648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496876203
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTAATTGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT23885650.48071632039902706No Hit
TCTTAATTGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15967790.3213635489804288No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGAAGCTATCTCGTATG15107310.30404575443110926TruSeq Adapter, Index 19 (97% over 37bp)
TCTTAATTGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5264200.10594590701297885No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)