FastQCFastQC Report
Sat 17 Dec 2022
EGAF00007710660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007710660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516189749
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACCTCCCAGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT35001090.6780663519143229No Hit
TACCTCCCAGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA22654340.43887620867883603No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCAACGCATCTCGTATG15031070.29119272571993676TruSeq Adapter, Index 6 (97% over 37bp)
TACCTCCCAGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC9169420.17763661556169338No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)