FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007710664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007710664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492673590
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTGTGGTATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT25804700.523768688311464No Hit
ATTTGTGGTATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17152840.34815830091481054No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTGAAGATCTCGTATG14931860.30307814957160584TruSeq Adapter, Index 16 (97% over 36bp)
ATTTGTGGTATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6454790.13101554723077405No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)