FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007710670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007710670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495698448
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT21174320.4271613132022556No Hit
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA14573270.2939946666930053No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACAACGTTCCATCTCGTATG6319380.12748436121793144TruSeq Adapter, Index 1 (97% over 35bp)
GTAGTCGATATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC5183220.10456397474942265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)