FastQCFastQC Report
Sat 17 Dec 2022
EGAF00007710674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007710674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509984405
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAAGAATCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT37785140.7409077538361197No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGCAGAATTATCTCGTATG33382300.6545749178349874TruSeq Adapter, Index 5 (97% over 36bp)
TGTAAGAATCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA28692180.5626089684056124No Hit
TGTAAGAATCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5356340.10502948614673815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)