FastQCFastQC Report
Fri 13 Jan 2023
EGAF00007772641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007772641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences345255601
Sequences flagged as poor quality0
Sequence length77-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGATGACTACGCTACTCATGGCCGTGTTCCTCATTAGAGCCGATCTAG7415324821.477782774623254No Hit
CGAGATGACTACGCTACTCATGGGGATAACCGCGCTTTGAGCCGATCTAG4771589913.820456166908063No Hit
CGAGATGACTACGCTACTCATGGCCACTCATTTCCGGTGAGCCGATCTAG164479464.763991069908812No Hit
CGAGATGACTACGCTACTCATGGACTCTTTCGTTTACGGAGCCGATCTAG115159363.3354812975213686No Hit
CGAGATGACTACGCTACTCATGGAGACTAATAGCTGACGAGCCGATCTAG112073313.246096795399997No Hit
CGAGATGACTACGCTACTCATGGGTCTCTTGGCTTAAAGAGCCGATCTAG69668382.017878342833894No Hit
CGAGATGACTACGCTACTCATGGCAGCCATTCATTAGGGAGCCGATCTAG67221901.9470183772630527No Hit
CGAGATGACTACGCTACTCATGGTCAGGGTGTGCTGTAGAGCCGATCTAG66271601.9194938418971514No Hit
CGAGATGACTACGCTACTCATGGTGTTCCCGCTCAACTGAGCCGATCTAG58674251.699443827415272No Hit
CGAGATGACTACGCTACTCATGGTGTACCCGCTTGTGAGAGCCGATCTAG56669811.6413871298788865No Hit
CGAGATGACTACGCTACTCATGGATATGTATCACGCGAGAGCCGATCTAG53733571.556341731875336No Hit
CGAGATGACTACGCTACTCATGGGCATTGTACGATTCAGAGCCGATCTAG50837321.4724546061745136No Hit
CGAGATGACTACGCTACTCATGGGCCGGACGACATTAAGAGCCGATCTAG45715261.3240990115030749No Hit
CGAGATGACTACGCTACTCATGGGAGATGTCCGAATTTGAGCCGATCTAG43385451.2566182814801026No Hit
CGAGATGACTACGCTACTCATGGGCTTCTCCTTCCTTAGAGCCGATCTAG42814901.240092843562587No Hit
CGAGATGACTACGCTACTCATGGTCCTTTCCTGATAGGGAGCCGATCTAG40196001.1642388967355233No Hit
CGAGATGACTACGCTACTCATGGCCATTCAACTTCCGGGAGCCGATCTAG36563421.0590246731435358No Hit
CGAGATGACTACGCTACTCATGGCTCCTACCTAAACTGGAGCCGATCTAG35609611.0313984739671176No Hit
CGAGATGACTACGCTACTCATGGCTCCGAATCATGTTGGAGCCGATCTAG32885650.9525015641962027No Hit
CGAGATGACTACGCTACTCATGGGTCCCTGCAACTTGAGAGCCGATCTAG30727580.8899951198764187No Hit
CGAGATGACTACGCTACTCATGGCTCGTTTCCGTATCGGAGCCGATCTAG28341260.8208776314681714No Hit
CGAGATGACTACGCTACTCATGGCTTCACTCTGTCAGGGAGCCGATCTAG27738720.8034256336365706No Hit
CGAGATGACTACGCTACTCATGGTTTGTCCTGTACGCCGAGCCGATCTAG26106970.7561635473655937No Hit
CGAGATGACTACGCTACTCATGGTTTCAACGCCCTTTCGAGCCGATCTAG26035970.7541070999163891No Hit
CGAGATGACTACGCTACTCATGGTCCCTTGCGATTTACGAGCCGATCTAG25284230.7323336660366011No Hit
CGAGATGACTACGCTACTCATGGGCGCAACTTGATGATGAGCCGATCTAG22873380.6625056895166779No Hit
CGAGATGACTACGCTACTCATGGGCAGAAATCTCCCTTGAGCCGATCTAG21639920.6267796941547662No Hit
CGAGATGACTACGCTACTCATGGAAGTTCACTCTTTGCGAGCCGATCTAG21599710.6256150497613505No Hit
CGAGATGACTACGCTACTCATGGTGGATTCCCGGACTTGAGCCGATCTAG20250170.5865269076402325No Hit
CGAGATGACTACGCTACTCATGGGGGTTGTTGTCTTTGGAGCCGATCTAG17328320.5018983022957534No Hit
CGAGATGACTACGCTACTCATGGGACAAGTGATCTGCAGAGCCGATCTAG17322330.501724807644757No Hit
CGAGATGACTACGCTACTCATGGCTCATTGTAACTCCTGAGCCGATCTAG15354550.444729932129327No Hit
CGAGATGACTACGCTACTCATGGGGACTAAGTTTCGTTGAGCCGATCTAG15183230.4397678113265424No Hit
CGAGATGACTACGCTACTCATGGCCTTCCGTATCCCTTGAGCCGATCTAG14631280.42378110471262126No Hit
CGAGATGACTACGCTACTCATGGTGGCTTCAGGTCCTAGAGCCGATCTAG12877580.37298685271727133No Hit
CGAGATGACTACGCTACTCATGGCTGGGCAATTACTCGGAGCCGATCTAG11524670.3338011017524376No Hit
CGAGATGACTACGCTACTCATGGTCTCAGACCTCCGTAGAGCCGATCTAG10998370.3185573229846023No Hit
CGAGATGACTACGCTACTCATGGAAGTATGCCCTACGAGAGCCGATCTAG10251230.2969171237282838No Hit
CGAGATGACTACGCTACTCATGGCCGTGTTCCTCATTAGAGCCGATTTAG10152630.29406126853826187No Hit
CGAGATGACTACGCTACTCATGGGAGCTACTTCACTCGGAGCCGATCTAG8209810.2377893356753972No Hit
CGAGATGACTACGCTACTCATGGCATTAACGGGATGCCGAGCCGATCTAG7636130.22117324028582522No Hit
CGAGATGACTACGCTACTCATGGAATAGCGAGCAAGTAGAGCCGATCTAG7244210.20982165036621667No Hit
CGAGATGACTACGCTACTCATGGGGATAACCGCGCTTTGAGCCGATTTAG6416500.1858478177157798No Hit
CGAGATGACTACGCTACTCATGGTACGATTTGTCAGGGGAGCCGATCTAG5677560.1644451236578201No Hit
CGAGATGACTACGCTACTCATGGCCGTGTTCCACATTAGAGCCGATCTAG5329600.15436679331380349No Hit
CGAGATGACTACGCTACTCATGGTCAATCCTTCCGCTTGAGCCGATCTAG4827270.13981728279043906No Hit
CGAGATGACTACGCTACTCATGGGGATAACCGCGCTTTGAGCGATCTAGT4688340.13579330752117183No Hit
CGAGATGACTACGCTACTCATGGGGATAACCGCGCTTTGAGCCGATCTGT4617490.13374120467925443No Hit
CGAGATGACTACGCTACTCATGGAGACTAATAGCTGACGAGCCGATTTAG4144580.12004381646512376No Hit
CGAGATGACTACGCTACTCATGGCCACTCATTTCCGGTGAGCCGATTTAG3965620.11486041033118534No Hit
CGAGATGACTACGCTACTCATGGACTCTTTCGTTTACGGAGCCGATTTAG3691440.1069190474914265No Hit
CGAGATGACTACGCTACTCATGGCCGTGTTCCTTATTAGAGCCGATCTAG3643960.10554383446483176No Hit
CGAGATGACTACGCTACTCATGGGGATAACCGGCTTTGAGCCGATCTAGT3489700.10107584033082784No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)