FastQCFastQC Report
Sat 18 May 2024
EGAF00007808034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007808034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences585051164
Total Bases76.6 Gbp
Sequences flagged as poor quality0
Sequence length32-151
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN112483141.9226205658826787No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)