Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007808280 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18792463 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 2045002 | 10.882032866048478 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 541439 | 2.8811497460444646 | No Hit |
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 49528 | 0.2635524678164858 | Clontech SMART CDS Primer II A (100% over 25bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC | 34605 | 0.1841429726374877 | TruSeq Adapter, Index 2 (100% over 50bp) |