Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007808458 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9698017 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 379751 | 3.9157592732617403 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 56360 | 0.5811497340126337 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTAT | 37512 | 0.3868007243130219 | TruSeq Adapter, Index 15 (97% over 40bp) |
AAGCAGTTGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 13938 | 0.14372010277977448 | Clontech SMART CDS Primer II A (96% over 26bp) |