Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007808505 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13947272 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT | 1459358 | 10.46339384504726 | Clontech SMART CDS Primer II A (100% over 26bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 89256 | 0.6399531033739071 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTAT | 42555 | 0.30511343006718444 | TruSeq Adapter, Index 16 (97% over 40bp) |
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT | 20147 | 0.14445118730028353 | Clontech SMART CDS Primer II A (100% over 25bp) |