FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007810103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007810103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24889393
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTA602640.24212723869963404No Hit
GGGGAAGTATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGGTGTACTCG356070.1430609416629807No Hit
GGGGGCTTCAATCGGGAGTACTACTCGATTGTCAACGTCAAGGAGTCGCA346330.13914762806790829No Hit
GTTGAGAATGAGTGTGAGGCGTATTATACCATAGCCGCCTAGTTTCAAGA290220.11660388825070986No Hit
GTTTGGATGAGAATGGCTGTTACTACGAGGGCTATGTGGCTGATTGAAGA263680.10594071137050229No Hit
GGTAAGGCGAGGTTAGCGAGGCTTGCTAGAAGTCATCAAAAAGCTATTAG262960.10565143151542507No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)