FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007810104

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007810104
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24889393
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTA588880.23659877924704711No Hit
GGGGGCTTCAATCGGGAGTACTACTCGATTGTCAACGTCAAGGAGTCGCA259630.10431351218569292No Hit
GGTAAGGCGAGGTTAGCGAGGCTTGCTAGAAGTCATCAAAAAGCTATTAG250650.10070554954875759No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)