FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007810108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007810108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24701273
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTA758160.3069315496411865No Hit
GGTAAGGCGAGGTTAGCGAGGCTTGCTAGAAGTCATCAAAAAGCTATTAG306540.12409886729319577No Hit
GTTGAGAATGAGTGTGAGGCGTATTATACCATAGCCGCCTAGTTTCAAGA303900.12303009646506882No Hit
GTTTGGATGAGAATGGCTGTTACTACGAGGGCTATGTGGCTGATTGAAGA271420.1098809765796281No Hit
GGGGGCTTCAATCGGGAGTACTACTCGATTGTCAACGTCAAGGAGTCGCA247290.10011224927557379No Hit
GTTTTATATTGATAATTGTTGTGATGAAATTGATGGCCCCTAAGATAGAG247050.1000150882911986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)