FastQCFastQC Report
Wed 4 Jan 2023
EGAF00007813541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007813541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6166214
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG122410.19851727494374993No Hit
GTCAGTATCAGGCTGCGGCTTCAAAGCCGAAGTGGTGGTTGGATGTGAAGTGGAATTTTAGTTGTCGTAGTAAGC91800.1488757931528163No Hit
GCTTATTTTAGGTTGATATATGTTGGTTCTTCAAATGTGTGATAGGGAGG63380.10278592342075706No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)