FastQCFastQC Report
Wed 4 Jan 2023
EGAF00007813706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007813706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4088340
Sequences flagged as poor quality0
Sequence length35-76
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG422831.034233943360875No Hit
GGAGTCTAACACGTGCGCGAGTCAGGGGCTCGCACGAAAGCCGCCGTGGC79280.19391733564233896No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT74670.1826413654441656No Hit
GTCTAACACGTGCGCGAGTCAGGGGCTCGCACGAAAGCCGCCGTGGCGCA63090.15431691102012063No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)