FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007815931

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007815931
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1308
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGGAAACCAGCCAGGAGCCTCCCCACAGGGACTTCAGCACAGATGGCCG20.1529051987767584No Hit
GCTATATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCTTACATAAATC20.1529051987767584No Hit
CCAGTCATCCCAGCACTTTGGGAGGATGAGGTGGGTGGATCACGAGGTAG20.1529051987767584No Hit
ATTGCGCAATGTGGGCTGGGGGACTGGGATCATCAGTCTCTTCTGTGCAC20.1529051987767584No Hit
ATACAAAATGTCCCGATGTCCAGAACAGCCAAACCCATGAAGAAAAGTAG20.1529051987767584No Hit
ATTGCGCAATGCACGCGACGGGAGCTGTGTTGCTGGGCCTGGTGCTGCTG20.1529051987767584No Hit
CATTCAGACCACCTCAACAATGCATGATCAGTAACATTACAATGAACATT20.1529051987767584No Hit
GGATAAAGTCAGCCATGTGAGCACTGGGGGTGGTGCCAGTTTGGAGCTCC20.1529051987767584No Hit
GTGTTGAGCTTGAACGCTTTCTTAATTGGTGGCTGCTTTTAGGCCTACTA20.1529051987767584No Hit
ATGCAGGTGCATAGGCCCCAGACCAAACTAGACCACCAGCATGTTCATGT20.1529051987767584No Hit
ATATAATATATACAAAATATCTTAAAATATTGGTTGTAGACAGTCTTATA20.1529051987767584No Hit
ATTGCGCAATGCATATTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1529051987767584No Hit
GCGCAGCACAGAACTGCCAAAGGCCCTGCAAGGACAAGGCCAGGCAAGGT20.1529051987767584No Hit
GGCTAACACGGTGAAACCCCGTCTCTCCTAAAAATACAAAAAATTAGCTG20.1529051987767584No Hit
ATTGCGCAATGATAAAGCCGGGCATGGTGGCACATGCCTGTAATCCCAGC20.1529051987767584No Hit
CCTCAGTACAAAAGGTATTGAAACATTTTTGATACATAACAGACCTCAGT20.1529051987767584No Hit
ATTGCGCAATGATCCAAGTGGGATGGTCATCTAGAAGCTGCCAAAATCTA20.1529051987767584No Hit
ATTGCGCAATGCTCTCCCCGGGTCTCGCGCCGCACGCTCTGCGGGTTCCT20.1529051987767584No Hit
AATCTACTTCAACACTTCATGTATTGTGTGGGTCTGTTGTAGGGTTGCCA20.1529051987767584No Hit
CATACATACACACATATACACACATGCAGACACTGATGCGCACACACACG20.1529051987767584No Hit
GGCCATGAGCGCTATGAGAACGGGGCTTTCCAGGAGCGGGCGCTCCGGTG20.1529051987767584No Hit
GGTCTTACCACTCACATGAACTCAGGGACCCGGGGCAGCTGTGTGTCAGG20.1529051987767584No Hit
AGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGAATCACTTGACCCTGGG20.1529051987767584No Hit
ATTGCGCAATGAAGCGCCCGGGGCTAAACCTAGCCCCAAACCCACTCCAC20.1529051987767584No Hit
ATTGCGCAATGGACTCACGGGGAGTGAGCCAAGATCACACCACTGCACTC20.1529051987767584No Hit
CCGCCTGCTGGACATCGTGGGGCTGGCCAACCGGGCCGGCGGGGTGGACC20.1529051987767584No Hit
GATTTCAGGTGCTTCACCTACCTCAGCCTCCTAAAGTGCTGGGATTACAG20.1529051987767584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)