FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007815932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007815932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1308
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT20.1529051987767584No Hit
AGCATATCCACACATAAAGAGGGTGTTGCCTAGCAAACTCTTTTGGGAAA20.1529051987767584No Hit
GTCTCACTCTGTCACCCAAGCTGGAGTGCAATGGTGCAATCTCAGCTCAC20.1529051987767584No Hit
GTGTATGAGTTGGTCGTAGCGGAATCGGGGGTATGCTGTTCGAATTCATA20.1529051987767584No Hit
GCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTGAAAAAAAAAAAAA20.1529051987767584No Hit
ACGTAGTACGTGTCGTGTAGTACGATGTCTAGTGATGAGTTTGCTAATAC20.1529051987767584No Hit
CGTCCACCTTCTCGGGCAGCACCACATCCTCCACCTTCTGCTGGTACACG20.1529051987767584No Hit
CAAGTGATTCTCCTCCCTCAGCCTCCCGAGTACCTGGGACTATAGGTGCC20.1529051987767584No Hit
TGGTATTACTGCCGTGGCTTAATTCGGTCAGAGCAAAACATCCAAAAATC20.1529051987767584No Hit
AGTTAGAAATCACCAGTGTTGGAAACAGCAGACATTGGGGTCAGGGCTGC20.1529051987767584No Hit
GATGGTAGTCCCAGCACTGACACTAACAGAATATGCAAAATCAGGCTAAT20.1529051987767584No Hit
TACTTCCTGCTCTAATAATGTCTTCTTTAAACGGAATCCAGCATAAAAGG20.1529051987767584No Hit
GTCCACCCCGCCGGCCCGGTTGGCCAGCCCCACGATGTCCAGCAGGCGGC20.1529051987767584No Hit
CCTGTAATCTCAGCTACTCGGAAGTCTGATGCAGGAGAATTGCTAAAACC20.1529051987767584No Hit
GTGTGTATTGTTCCCAGTGACACTTCAGAGAGCTGGTAGTTAGTAGCATG20.1529051987767584No Hit
GTTGTAAATATCCCTTAGCAGTTTGTTGATGACAGCAGAATGAAGAGGCA20.1529051987767584No Hit
GGAGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTC20.1529051987767584No Hit
GCTGTTCCTCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAGAGGGT20.1529051987767584No Hit
CTGTAGTCCTTTCTCTCAATTTTCTTTTAAATACATTTTTTACTCCATGA20.1529051987767584No Hit
GTCCAGGAATATCCTTCTCTCCTTTTTTTACAATAACCAAGTTGAGAACG20.1529051987767584No Hit
TGATAGGATTGTCCACAGAAGAAATCTAAGTAATTTTCCATTATAACTGG20.1529051987767584No Hit
GGCTTCAGTGAGCCGAAATTGTGCCACTGCACTCCCGCCTGGGCAACAGA20.1529051987767584No Hit
CACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACA20.1529051987767584No Hit
GCTCCATCGCTCTGCTCATGTCCACACTGCCAAGGTCCCCACCACGGGGG20.1529051987767584No Hit
CTATAGTACAGTACATATACAATCTTTAAACTAAGATAACAGCTCTGAGG20.1529051987767584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)