FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007816030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19789
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTTAATGGTGTA4252.147657789681136No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC3771.9050987922583256No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1670.8439031785335288No Hit
CATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGA1460.7377836171610491No Hit
AGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATAC1400.7074637424831978No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1200.6063974935570265No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTTAATG860.43458487038253574No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT740.3739451210268331No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG470.2375056849765021No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG460.23245237253019355No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTTAATGGGGTA450.227399060083885No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTTAATGGTG450.227399060083885No Hit
GCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATC440.22234574763757642No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG430.21729243519126787No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC420.21223912274495935No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG380.19202587295972512No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT360.181919248067108No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC350.17686593562079944No Hit
ATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAG350.17686593562079944No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTTTATGGTGTA330.16675931072818231No Hit
AGCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT320.16170599828187376No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT310.15665268583556521No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC300.15159937338925664No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA290.14654606094294811No Hit
CAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCA290.14654606094294811No Hit
CAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCA290.14654606094294811No Hit
TCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGT280.14149274849663954No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGT280.14149274849663954No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCC270.136439436050331No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACC270.136439436050331No Hit
CCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGT260.13138612360402244No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTTAATGGTGTT250.1263328111577139No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC250.1263328111577139No Hit
CGAGCATCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACG240.12127949871140534No Hit
GCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGT240.12127949871140534No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT220.11117287381878821No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCC210.10611956137247967No Hit
ACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGT200.10106624892617111No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC200.10106624892617111No Hit
ACGAGCATCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGAC200.10106624892617111No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAA200.10106624892617111No Hit
AGCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG200.10106624892617111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)