FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51731
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGTAAGTCACATCT3850.7442345982099708No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2630.5083992190369411No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG1500.2899615317701185No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGTAAGTCACATCG1500.2899615317701185No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGTAAGTCA1380.26676460922850903No Hit
ATTGCGCAATGATGCTCGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA1020.1971738416036806No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA890.17204384218360366No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT880.1701107653051362No Hit
ATTGCGCAATGGACCAAAAGGGCAAAACCACATGTGGCGGAGACAGTTTG760.1469138427635267No Hit
ATTGCGCAATGGTGGTACGGGGCCATGAAGATCCATAAAGCCAGATAAAG610.11791768958651487No Hit
ATTGCGCAATGCACGGCCAGGGTGACCGAGTGAGACTCCATCTCAAAAAA610.11791768958651487No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT600.1159846127080474No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT570.11018538207264503No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC530.1024530745587752No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG520.10051999768030774No Hit
ATTGCGCAATGATGCTCGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA520.10051999768030774No Hit
ATTGCGCAATGGCAGAAGGGGGATATCTCTTGGTGGGAGGAAGGTTGAAG520.10051999768030774No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)