FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127801
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGTAGGACAATCT5980.467914961541772No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2760.21596075148081784No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG2330.18231469237329911No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGTAGGAC1470.11502257415826167No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA1470.11502257415826167No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT1450.11345764117651662No Hit
ATTGCGCAATGGTCGCTCGGGGATAGGTTTGGTCCTAGCCTTTCTATTAG1380.10798037574040892No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)