FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39465
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGGAGCAATATCT5941.5051311288483467No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3910.9907512986190294No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGGAGCAATATCG3090.7829722538958571No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG2510.6360065881160522No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGGAGCAA2060.5219815025972381No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA1630.4130241986570379No Hit
ATTGCGCAATGATGCTCGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA1360.3446091473457494No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC1220.30913467629545166No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT1210.30660078550614467No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGGAGCAATAT1010.25592296972000506No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG970.24578740656277714No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT960.24325351577347015No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT780.1976434815659445No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC770.19510959077663753No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT750.19004180919802355No Hit
ATTGCGCAATGATGCTCGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA730.18497402761940962No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG730.18497402761940962No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC720.18244013683010263No Hit
ATTGCGCAATGGGAAAGAGGGGGTGTGAAGTGAACAACGGAGCATGAACG700.17737235525148864No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT670.16977068288356773No Hit
ATTGCGCAATGGTATGGAGGGGCTTCGGAAGAAGGTGTGCCCTATTAGTG650.16470290130495374No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT630.15963511972633979No Hit
ATTGCGCAATGGATGGTAAGGGCCGACACTGGTGCGCGAGATGAGTATTC620.15710122893703282No Hit
ATTGCGCAATGGCACGTGGGGGTGGCCACACTGTCTCCTCCTGAGACTCA610.15456733814772583No Hit
ATTGCGCAATGCCGAAAGTGGGCTAGCGGATGAGCTGTGGATAGGGGTGA600.15203344735841884No Hit
ATTGCGCAATGTACCACTCGGGATCCGGAGATTTCCGAATGGGGAAACCC590.14949955656911187No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC590.14949955656911187No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGCTGCTG590.14949955656911187No Hit
ATTGCGCAATGGCGAGGCAGGGAGCGAACCTGGGGAACTGAAACATCTAA580.14696566577980488No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC580.14696566577980488No Hit
ATTGCGCAATGGTTAATGTGGGGAGAACTCAGGAGAAGGAACTCGGCAAA560.14189788420119093No Hit
ATTGCGCAATGCAAAGACTGGGGGCATGCCTTACACATGCAAGTCGAACG540.13683010262257697No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC520.13176232104396302No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG520.13176232104396302No Hit
ATTGCGCAATGGACAGGCCGGGCTTTGAAGCAGGGTCGCTAGATCTTGTG510.12922843025465602No Hit
ATTGCGCAATGCCTCACAAGGGCTGGTTCTCTCCGAAAACTATTTAGGTA500.12669453946534903No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT500.12669453946534903No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG480.12162675788673508No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT470.11909286709742811No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGC460.11655897630812112No Hit
ATTGCGCAATGGACACCTGGGGAGCCAACGTTGAAATACCACCCTGGTGT440.11149119472950715No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGG440.11149119472950715No Hit
ATTGCGCAATGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGG440.11149119472950715No Hit
ATTGCGCAATGCGTGGATTGGGGGCGTAACGATGGCCACACTGTCTCCTC430.10895730394020017No Hit
ATTGCGCAATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGG430.10895730394020017No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTGA430.10895730394020017No Hit
ATTGCGCAATGACGTATATGGGGTAGGAGCCCGCAAGGGTGACTGCGTAC430.10895730394020017No Hit
ATTGCGCAATGGTCCGATCGGGGAGTACGGCAGAGGGGGATGGAATTCCG420.10642341315089321No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGCCTGT420.10642341315089321No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTCT420.10642341315089321No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGGAGCAATATCTCG410.10388952236158622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT410.10388952236158622No Hit
ATTGCGCAATGCAGCGCTCGGGTCTCCTCCTGAGACTCAGCGAAGTTGAA410.10388952236158622No Hit
ATTGCGCAATGCAGGACGGGGGCCGATGGCGAAGGCAATCCCCTGGGCCT410.10388952236158622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGCTGCT400.10135563157227924No Hit
ATTGCGCAATGTCCAGGAAGGGGGTCCCTAAAATTGGCTAAGTGGGAAAC400.10135563157227924No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)