FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62521
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTTACAGAATCT4590.7341533244829737No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3130.5006317877193263No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTTACAGAATCG2300.3678763935317733No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG1800.2879032645031269No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTTACAG1270.2031317477327618No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA1240.198333359991043No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT1010.16154572063786568No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC930.14875001999328225No Hit
ATTGCGCAATGATGCTCGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA920.14715055741270933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT870.13915324450984468No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT740.11836023096239665No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT710.11356184322067785No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCGTTACAGAAT680.10876345547895906No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT660.10556453031781321No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)