FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32751
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGGT3080.9404292998687064No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC2090.6381484534823364No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGGG1910.5831882995939055No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGA1670.509908094409331No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1630.49769472687856864No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1400.4274678635766847No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGTT1100.3358676070959665No Hit
CATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGA960.2931208207382981No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGGA800.2442673506152484No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTG790.2412140087325578No Hit
AGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATAC790.2412140087325578No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGTA680.20762724802296115No Hit
GCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAG660.20152056425757994No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA610.1862538548441269No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT560.17098714543067386No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC550.16793380354798326No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG510.15572043601722085No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGTG490.14961375225183965No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAG480.14656041036914905No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC470.14350706848645842No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG450.1374003847210772No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC450.1374003847210772No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCC430.131293700955696No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT430.131293700955696No Hit
TCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAG420.1282403590730054No Hit
AGCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT420.1282403590730054No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG410.1251870171903148No Hit
ACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAG400.1221336753076242No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCA380.116026991542243No Hit
GCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATC370.11297364965955237No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT370.11297364965955237No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC360.10992030777686176No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC360.10992030777686176No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAA330.10076028212878997No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACC330.10076028212878997No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)