FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22132
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGGT2631.1883245978673413No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC1570.7093800831375384No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGGG1280.57834809325863No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1010.45635279233688775No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGTT880.3976143141153081No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGA880.3976143141153081No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT830.3750225917223929No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGTA700.3162841135008133No Hit
CATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGA650.2936923911078981No Hit
AGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATAC550.2485089463220676No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGGA520.23495391288631842No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG490.2213988794505693No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTG430.19428881257907105No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA420.18977046810048798No Hit
GCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAG400.1807337791433219No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC370.16717874570757274No Hit
CCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAG370.16717874570757274No Hit
TCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAG320.1445870233146575No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG310.14006867883607446No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG310.14006867883607446No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC280.1265136454003253No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC270.12199530092174228No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACCGAGAAGGAGTGTG260.11747695644315921No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA260.11747695644315921No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC250.11295861196457617No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG250.11295861196457617No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT250.11295861196457617No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCA230.10392192300741009No Hit
ATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAG230.10392192300741009No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCC230.10392192300741009No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)