FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007816420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11948
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGGGGGGG400.33478406427854035No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGGGGGGT340.2845664546367593No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGG250.2092400401740877No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC190.15902243053230666No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT190.15902243053230666No Hit
CGAGCATCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACG130.10880482089052561No Hit
TCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGG120.1004352192835621No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.1004352192835621No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)