FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55262
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGGGGGGG2460.445152184141001No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1690.30581593138141944No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC1370.24790995620860629No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGGGGGGT1250.22619521551880134No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1090.1972422279323948No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGG1020.1845752958633419No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT670.12124063551807752No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG650.11762151206977671No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG570.10314501827657341No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)