FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86354
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCTGTTCCTCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAGAGG1800.2084443106283438No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGGGGGGG1620.18759987956550941No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1610.18644185561757418No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG1510.17486161613822174No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT1400.16212335271093406No Hit
GTTTAGGAGTGGGACTTCTAGGGGATTTAGCGGGGTGATGCCTGTTGGGG1280.14822706533571114No Hit
TCCATATAGTCACTCCAGGTTTATGGAGGGTTCTTCTACTATTAGGACTT1130.1308567061166825No Hit
TCTATAGGGTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATAT1100.12738263427287677No Hit
GATTTAGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAGATTCTATCT1070.12390856242907103No Hit
GTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGA1070.12390856242907103No Hit
CTATTAGACTATGGTGAGCTCAGGTGATTGATACTCCTGATGCGAGTAAT1040.12043449058526531No Hit
ATCCAGTACGGTGCCGATGGCATAAACCAGGAAAACTTAACTTCCAGCTT980.11348634689765384No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG940.10885425110591287No Hit
GTAGTATAGTGATGCCAGCAGCTAGGACTGGGAGAGATAGGAGAAGTAGG920.10653820321004238No Hit
GTTATATGTTTGGGATTTTTTAGGTAGTGGGTGTTGAGCTTGAACGCTTT890.10306413136623666No Hit
CATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATG880.1019061074183014No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATGTGGCATGGGGGGT880.1019061074183014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)