FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816492

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816492
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22976
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAACCGCTGTGTA5042.193593314763231No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC2661.1577298050139275No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1840.8008356545961003No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1300.5658077994428969No Hit
CATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGA1270.55275069637883No Hit
AGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATAC1090.474408077994429No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAACCGCT1030.44829387186629527No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAACCGCGGTGTA850.36995125348189417No Hit
CTATATAGAAGGAAGTTGAACATGGATCATACCTTCTCCCCTATCTCTAA750.3264275766016713No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG660.28725626740947074No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT660.28725626740947074No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG580.2524373259052925No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC540.23502785515320335No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAACCGCTGTG540.23502785515320335No Hit
AGCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT540.23502785515320335No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC520.22632311977715877No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA430.18715181058495822No Hit
GCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAA420.18279944289693592No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC420.18279944289693592No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC400.17409470752089137No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT360.15668523676880222No Hit
ATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAG350.15233286908077995No Hit
GCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATC340.14798050139275765No Hit
TCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAA340.14798050139275765No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG330.14362813370473537No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG320.1392757660167131No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAACCGCTGGGTA320.1392757660167131No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCC320.1392757660167131No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC320.1392757660167131No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAACCGCTGTGTT310.1349233983286908No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAA310.1349233983286908No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAT310.1349233983286908No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT310.1349233983286908No Hit
CAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCA300.13057103064066852No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGATCCAACCGCTGTGTAGA300.13057103064066852No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCC290.12621866295264625No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCA280.12186629526462396No Hit
CCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATCCAA280.12186629526462396No Hit
ACGAGCATCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGAC280.12186629526462396No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT280.12186629526462396No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC270.11751392757660167No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA260.11316155988857939No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA250.10880919220055711No Hit
CGAGCATCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACG250.10880919220055711No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCC240.10445682451253482No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC240.10445682451253482No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)