FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94749
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGCCTTCTATCT7150.7546253786319644No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGCCTTCTATCG4410.46544026849887593No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGCCTTC2470.26068876716376954No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2370.2501345660640218No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG2310.24380204540417313No Hit
ATTGCGCAATGTATGCTGCTGATGCTCGCCGACCGTTGACTATTCTCTAC1580.16675637737601454No Hit
ATTGCGCAATGATGCTCGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA1540.1625346969361154No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA1520.16042385671616588No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT1330.14037087462664516No Hit
ATTGCGCAATGCTGCTGATGCTCGCCGACCGTTGACTATTCTCTACAAAC1070.11292995176730097No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC1050.11081911154735144No Hit
ATTGCGCAATGAGTAAGGTGGGGATAGCGATGATTATGGTAGCGGAGGTG1020.10765285121742708No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT1000.10554201099747754No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG990.10448659088750276No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)