FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007816581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6069
Sequences flagged as poor quality0
Sequence length151
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA691.1369253583786456No Hit
ATTGCGCAATGATGCTCGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA350.5767012687427913No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGTAACGGTATCT290.4778381941011699No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC200.32954358213873786No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGTAACGGTATCG150.2471576866040534No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC130.21420332839017958No Hit
TTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGTAACGGTATCT130.21420332839017958No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGTAACGG110.1812489701763058No Hit
ATTGCGCAATGCGGGGTCGGGGAGCGAACCTGGGGAACTGAAACATCTAA110.1812489701763058No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG110.1812489701763058No Hit
ATTGCGCAATGATGTAGGCGGGAGGAAAATAATCAATTAAAGAATGTATA100.16477179106936893No Hit
ATTGCGCAATGAGCAAAGGGGGGGCCGCGCGGAGCTGAGGGACCATGGCT100.16477179106936893No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT90.14829461196243204No Hit
ATTGCGCAATGATGCTCGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA90.14829461196243204No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT70.11534025374855825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA70.11534025374855825No Hit
ATTGCGCAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.11534025374855825No Hit
ATTGCGCAATGTTCGGCCCGGGAACGTATTCACCGCGGCATGCTGATCCG70.11534025374855825No Hit
ATTGCGCAATGACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGT70.11534025374855825No Hit
TTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGTAACGGTATCG70.11534025374855825No Hit
ATTGCGCAATGGGCATCATGGGCAGCATGGTTATGTTTGACAATCACTTC70.11534025374855825No Hit
CGTCAGATGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA70.11534025374855825No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)