FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007816582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6069
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC2283.7567968363816115No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAGCTTGGACGTGGG841.384083044982699No Hit
AGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATAC771.2687427912341407No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT761.2522656121272038No Hit
CATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGA681.1204481792717087No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT490.8073817762399077No Hit
ATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAG270.4448838358872961No Hit
AGCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT270.4448838358872961No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT270.4448838358872961No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT240.3954522985664854No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAGCTTGGAC170.2801120448179272No Hit
GCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATC160.26363486571099026No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAGCTTGGACGTGGT160.26363486571099026No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC160.26363486571099026No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC140.2306805074971165No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG140.2306805074971165No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC130.21420332839017958No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC130.21420332839017958No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG120.1977261492832427No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCC120.1977261492832427No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC110.1812489701763058No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG110.1812489701763058No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.1812489701763058No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.1812489701763058No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCC100.16477179106936893No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCA100.16477179106936893No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCCC90.14829461196243204No Hit
CAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCA90.14829461196243204No Hit
GATTAAGGCAGTTACTTTATTTTGAACAAGGAAGTGGCATAAGCAACTCA90.14829461196243204No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGATTTTTTTT90.14829461196243204No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCA90.14829461196243204No Hit
CAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCA80.13181743285549513No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAA80.13181743285549513No Hit
TCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAGCT80.13181743285549513No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC80.13181743285549513No Hit
CCACGAGCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTT80.13181743285549513No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA80.13181743285549513No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCC80.13181743285549513No Hit
TACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGCAGC70.11534025374855825No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA70.11534025374855825No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAGCTTGGACGTGTA70.11534025374855825No Hit
AGCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC70.11534025374855825No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC70.11534025374855825No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA70.11534025374855825No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCC70.11534025374855825No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)