FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007816602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007816602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34106
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATACGTTCTTCGTGTA1860.5453585879317422No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT740.21697062100510173No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGATACGTTCTTC460.13487362927344163No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT450.13194159385445375No Hit
GCATACGAGCATCAGCAGCATACGAGCATCAGCAGCATACGAGCATCAGC350.10262123966457515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)