FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007820806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007820806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79858476
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGAGAGATCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT4122800.5162632955830513No Hit
CCCGAGAGATCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA982520.12303265091109428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)