FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007820815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007820815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68764912
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGGATGTACGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT2891730.4205240602940058No Hit
CCCGGATGTACTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA812050.11809074953807838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)