FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007820935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007820935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences524965242
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACAACGCTGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT27630800.5263357988184673No Hit
TGACAACGCTGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17516430.3336683764674843No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTACTCCATCTCGTATG12922580.24616067819590998TruSeq Adapter, Index 14 (97% over 37bp)
TGACAACGCTGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6750290.12858546547354083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)