FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007820945

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007820945
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450027655
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATTCAGAAATCTCGTATG23635280.5251961682221506TruSeq Adapter, Index 13 (97% over 37bp)
TGTTGAACTCCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT12753300.2833892508228189No Hit
TGTTGAACTCCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA6574510.14609124410365404No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)