FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007820953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007820953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences515318612
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTGTGGTATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT30926990.600152784700895No Hit
ATTTGTGGTATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA22307750.4328923792102428No Hit
ATTTGTGGTATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7878660.15288910232491273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)