FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10860
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCG3933.6187845303867405No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3743.443830570902394No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCT2842.6151012891344383No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2522.3204419889502765No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA870.8011049723756906No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG790.7274401473296501No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC620.570902394106814No Hit
ATTGCGCAATGTGGTGGCCGGGGAGTGAAATAAGAAATAAAAAAATTGGT540.49723756906077343No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTC480.44198895027624313No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAAT460.423572744014733No Hit
ATTGCGCAATGTGCACTCCGGGCTGATCGAGATTACTAGTGACATTCTCG440.40515653775322286No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT420.3867403314917127No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT410.3775322283609577No Hit
ATTGCGCAATGTGCCGCTGGGGGAGCATCTGGACACCACGGGCTAGCCTC390.35911602209944754No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT380.34990791896869244No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAG370.3406998158379374No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA360.3314917127071823No Hit
ATTGCGCAATGGACATTGTGGGATCGCTTTGAAGTACAAGGGCTGCAGCC340.31307550644567217No Hit
ATTGCGCAATGGTTGCCTCGGGAAGGCCCAGCACGCCGTCGTTCTCGACA320.29465930018416203No Hit
ATTGCGCAATGGCACCACCGGGGCATCAATTCTTGAACAGTTTGGAAACG310.285451197053407No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT300.2762430939226519No Hit
ATTGCGCAATGACCAGTTCGGGAGGCTGATCTTCCCCAAGAGTCCATATC290.26703499079189685No Hit
ATTGCGCAATGGTGTCATGGGGGATGCCGTTTCGCAAAGTGCCGCCATGC270.24861878453038672No Hit
ATTGCGCAATGGGGTGACTGGGGAGTGAAATAAGAAATAAAAAAATTGGT260.23941068139963165No Hit
ATTGCGCAATGGGCCGTACGGGTGAGCTTGTCTTGGGAGTGTTTTTGATG260.23941068139963165No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGC260.23941068139963165No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG260.23941068139963165No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG250.23020257826887663No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCG240.22099447513812157No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA190.17495395948434622No Hit
ATTGCGCAATGGCTTTAATGGGCGGTATCAGAAAAAGATTGCTAGAATAT190.17495395948434622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG190.17495395948434622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG180.16574585635359115No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC180.16574585635359115No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC170.15653775322283608No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC160.14732965009208102No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC160.14732965009208102No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT160.14732965009208102No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG160.14732965009208102No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC160.14732965009208102No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGT140.1289134438305709No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT140.1289134438305709No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC140.1289134438305709No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAAGCG140.1289134438305709No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCGCG140.1289134438305709No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTGA120.11049723756906078No Hit
ATTGCGCAATGGGCGTTCCGGGACTGTGAGACGACAGGCTGTGGATGTGT120.11049723756906078No Hit
ATTGCGCAATGCGTGCGGCGGGAGAGGGCAACGAACGCCTTAGGCCGATC120.11049723756906078No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCT110.10128913443830571No Hit
ATTGCGCAATGGGGGGACTGGGGAGTGAAATAAGAAATAAAAAAATTGGT110.10128913443830571No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG110.10128913443830571No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTCT110.10128913443830571No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC110.10128913443830571No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA110.10128913443830571No Hit
ATTGCGCAATGGTCCTGAGGGGATTCTTGAAAGACAGTCATACAAGATTT110.10128913443830571No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTG110.10128913443830571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)