FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13883
Sequences flagged as poor quality0
Sequence length151
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT4493.234171288626378No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC3022.175322336670748No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGGG1801.2965497370885255No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGGG1300.9363970323417129No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGGT870.626665706259454No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT630.45379240798098397No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGGT600.43218324569617517No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGTG600.43218324569617517No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT550.3961679752214939No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG480.3457465965569402No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTT470.33854354246200385No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGTT460.33134048836706764No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA420.30252827198732263No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG420.30252827198732263No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC400.2881221637974501No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGTA400.2881221637974501No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG390.2809191097025139No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC360.25930994741770513No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC340.2449038392278326No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGGTGTGGG330.23770078513289636No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTG310.22329467694302382No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC300.21609162284808758No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTT290.20888856875315134No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAC290.20888856875315134No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC280.20168551465821505No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG270.19448246056327884No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTT250.18007635237340633No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGGGTTGTGGG240.1728732982784701No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGGTGTGGG240.1728732982784701No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGGGTTGTGGG210.15126413599366131No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAAT210.15126413599366131No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGTG190.1368580278037888No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAA190.1368580278037888No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA180.12965497370885257No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGA180.12965497370885257No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAAA170.1224519196139163No Hit
TTTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCT160.11524886551898006No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT150.10804581142404379No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGGTGTGTG150.10804581142404379No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAA150.10804581142404379No Hit
CTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGGGGGGGGGGG140.10084275732910752No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA140.10084275732910752No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCA140.10084275732910752No Hit
ACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTT140.10084275732910752No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGGTGTGGT140.10084275732910752No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC140.10084275732910752No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTG140.10084275732910752No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)