FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15502
Sequences flagged as poor quality0
Sequence length151
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT6524.205908914978712No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC4252.7415817313894983No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGGG1711.103083473100245No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGGG1591.0256741065668946No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGGT1140.7353889820668301No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT650.41930073538898205No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC630.4063991743000903No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTT570.36769449103341506No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGGT570.36769449103341506No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG550.35479292994452327No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC520.3354405883111857No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT510.32898980776673975No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGTG510.32898980776673975No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG480.30963746613340215No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG470.3031866855889563No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGTT440.28383434395561863No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTT420.27093278286672684No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC420.27093278286672684No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA410.264482002322281No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGGTGTGGG410.264482002322281No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG400.2580312217778351No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTG380.24512966068894337No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTGTGTA350.22577731905560572No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGGTGTGGG330.21287575796671396No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC320.2064249774222681No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC290.18707263578893046No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGTG290.18707263578893046No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA280.18062185524448457No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA270.1741710747000387No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTT260.16772029415559284No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCA250.16126951361114694No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT240.15481873306670108No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTG230.1483679525222552No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCA220.14191717197780931No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGGGTTGTGGG190.12256483034447169No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGT190.12256483034447169No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGGGTTGTGGG190.12256483034447169No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAA190.12256483034447169No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAA180.11611404980002579No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGTGTTGTGTT180.11611404980002579No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGGTGTGTG180.11611404980002579No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGA170.10966326925557993No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAG160.10321248871113405No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCGTGGGGTGTGGG160.10321248871113405No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAA160.10321248871113405No Hit
ACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTT160.10321248871113405No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACGCTTGTGTTTTGGG160.10321248871113405No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG160.10321248871113405No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)