FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10835
Sequences flagged as poor quality0
Sequence length151
%GC57

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG3813.516382095062298No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2942.7134287032764193No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCT2932.7041993539455467No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2041.8827872634979235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1060.9783110290724505No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT590.5445316105214583No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG580.5353022611905861No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAT560.5168435625288417No Hit
ATTGCGCAATGAGTTGCCCGGGAACGTATTCACCGCAGCGTTGCTGATCT510.47069681587448087No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC500.46146746654360865No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTAT490.4522381172127365No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT410.3784033225657591No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT390.35994462390401477No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA340.3137978772496539No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT330.3045685279187817No Hit
ATTGCGCAATGTCGAAACCGGGGGAAAAGAAACCAACAGGGATTGCCTTA330.3045685279187817No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT260.23996308260267651No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC260.23996308260267651No Hit
ATTGCGCAATGTTCATGGGGGGAAAAAGAGGGGGTTAGCAAAATGAAGAA240.22150438394093214No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG240.22150438394093214No Hit
ATTGCGCAATGTCTTGCCCGGGAACGTATTCACCGCAGCGTTGCTGATCT230.21227503461006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG220.20304568527918782No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG220.20304568527918782No Hit
ATTGCGCAATGGAGCCTCCGGGGTGAGAAACTCGTACAATAAATTATCCC180.16612828795569912No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC180.16612828795569912No Hit
ATTGCGCAATGAGGGGAGGGGGAGGCGGGATGGGACACCCAACACTTTTC180.16612828795569912No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG170.15689893862482696No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC170.15689893862482696No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG170.15689893862482696No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT160.14766958929395477No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAGCG160.14766958929395477No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGA140.12921089063221042No Hit
ATTGCGCAATGTTGTCACAGGGGGATGGAATTGAGCCGGCCGCCTGGAGC140.12921089063221042No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATG130.11998154130133826No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCGCG130.11998154130133826No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT130.11998154130133826No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT130.11998154130133826No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGGATGATCG130.11998154130133826No Hit
ATTGCGCAATGTAGTAATGGGGCTGATGGAGCAGAACGTCTACACGTTCT120.11075219197046607No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT120.11075219197046607No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG120.11075219197046607No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT120.11075219197046607No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG120.11075219197046607No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT110.10152284263959391No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG110.10152284263959391No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)