FastQCFastQC Report
Tue 7 May 2024
EGAF00007822115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23933
Total Bases3.6 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG5252.193623866627669No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCT3691.5418042034011616No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3521.4707725734341703No Hit
ATTGCGCAATGATGACCGGGGGATGAGACAGCCCCTTGGCGATAGCCGCC2120.8858062090001253No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1920.8022395855095475No Hit
ATTGCGCAATGGATTCCTAGGGGGGCCCATGGTGGGGCTGAACTAAGAGG1170.48886474741988045No Hit
ATTGCGCAATGCATTCGCGGGGAATAAACGACCAGGATTCGCGAAGCATG1080.45125976684912045No Hit
ATTGCGCAATGGGCCGGTCGGGGAGTGTTAACGAGACGCAAAACCAGGAA910.38022813688212925No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA910.38022813688212925No Hit
ATTGCGCAATGGTACAGGGGGGATGTGAGAAGAGGAAATAGAAAAGAATA900.3760498057076004No Hit
ATTGCGCAATGAGGAAGCGGTGTAGACCAAGAACGGCAAGACGAACAGAG890.37187147453307146No Hit
ATTGCGCAATGGCGGTGCAGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC870.3635148121840137No Hit
ATTGCGCAATGCGGATTGAGGGGAAAATAAAAGAGAGAAGGGTAAAAGAG840.35097981866042705No Hit
ATTGCGCAATGTTGCTGGAGGGGGATCATCACAGCGAACTAAAAACGCGG830.3468014874858981No Hit
ATTGCGCAATGGAGAGCAAGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC820.34262315631136925No Hit
ATTGCGCAATGCAAGTTGAGAGAGAGGGAGAAAGTATGTAAAAAGAAGAG810.3384448251368404No Hit
ATTGCGCAATGATACCCACGGGGTTTGCGTAAAGAGGAATCAAAGTTACG790.3300881627877826No Hit
ATTGCGCAATGTTGGAGAGGGGGTAAAAAGAGAAGAGAGAATGGTGGGAA750.313374838089667No Hit
ATTGCGCAATGGACGGGCTGGGGGAGATGTGGCCGAGTGGTCGAAGGCAC740.3091965069151381No Hit
ATTGCGCAATGGGAAGACTGGGAAAGAAAAGGGAGGGGAGGAAGAAAAGA710.29666151339155145No Hit
ATTGCGCAATGCAGGTCTGGGGGAAGGGACAAATGGGACGGCAACGCAGC700.2924831822170225No Hit
ATTGCGCAATGTTCGGGGAGGGACCGAACGATCATTCACCAAGGGAACAG700.2924831822170225No Hit
ATTGCGCAATGGAAGTGGTGGGGAGAGAAGTAAGAATAGGAAATGAATGA690.28830485104249365No Hit
ATTGCGCAATGTATGTCGGGGGATGGGGAAGAACAGGACGGAAAACGAAG680.2841265198679647No Hit
ATTGCGCAATGGTGAGGGGGGGTTTAGAGGAAAGGGGACGGGAAGGGAGA670.27994818869343585No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTG660.2757698575189069No Hit
ATTGCGCAATGGAGAGACGGGGGCAAGAGGGGAGTAGGGAAGTAAGTGGG650.27159152634437805No Hit
ATTGCGCAATGTGATGGGGGGGGAAAGCAGAGAAAAAAAGAGTAGGTACG650.27159152634437805No Hit
ATTGCGCAATGCGTGTTTTGGGGCGGAGGTCTAGTACACAACGGTAGGGG640.2674131951698491No Hit
ATTGCGCAATGAAGCTGGGGGGAAGGAAAGGGGGTTGAATAAAGATGGGG640.2674131951698491No Hit
ATTGCGCAATGGGGGGAAGGGGGATGGAGGGAAAAGAGGAAAGGAGAGAA640.2674131951698491No Hit
ATTGCGCAATGGACACGCGGGGGGGCGCCTAAGGACCAATGGATAGTGAA640.2674131951698491No Hit
ATTGCGCAATGTTCGTTAAGGGGGGCACGGGGAAGAGGAGGGAATTAAGG620.2590565328207914No Hit
ATTGCGCAATGTAAAGTCAGGGGGGGCCTTAGCTCAGTTGGTAAGGAGAA620.2590565328207914No Hit
ATTGCGCAATGCGCGGGGTGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC610.2548782016462625No Hit
ATTGCGCAATGTATACCCAGGGGGGGCCTTAGCTCAGTTGGTAAGGAGAA600.2506998704717336No Hit
ATTGCGCAATGGCGTGGGGGGGAGGTCGGGCGCGGGTTAGGGTTTGATGA600.2506998704717336No Hit
ATTGCGCAATGTCACGGTAGGGAGAATCGCGGTGGAGGGTCCTTGGTGTT600.2506998704717336No Hit
ATTGCGCAATGACGTGTGTGGGGGTGGCTTTGGATATCGAGTGGAGTATA590.24652153929720472No Hit
ATTGCGCAATGGGGCGGAGGGGGCGCGATGCGGGCGAAACGTAGCAAGAA590.24652153929720472No Hit
ATTGCGCAATGGAGGCGAGGAGAAAAGAGGTATAGAACAGAGTGGGAGAT590.24652153929720472No Hit
ATTGCGCAATGGGCTATAGGGGGGCCCATAGCTCAGTTGGTAGAGCAACT580.24234320812267582No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG580.24234320812267582No Hit
ATTGCGCAATGGCCCTTCATCTAGCAAAGCATGGGTTTGACATCGCTGTT580.24234320812267582No Hit
ATTGCGCAATGTAGGGGGATGGGAGCGAGGAATATGGTGAGTTAGTGAGG580.24234320812267582No Hit
ATTGCGCAATGAGCGGGACGGGGGATGAAGCGAAGAATACTGCAGAGCAA580.24234320812267582No Hit
ATTGCGCAATGAAACGTCTGGGGCCGCTGACTTGGTGTGAAATGCCGACC570.23816487694814692No Hit
ATTGCGCAATGCGGTTAGGGGGCAGACTGCTCCAAGCGGCGCTCGGTATC570.23816487694814692No Hit
ATTGCGCAATGGCAGGAAGGGGCGATGATGAGTCCTATAAGACATACCTG570.23816487694814692No Hit
ATTGCGCAATGGACAACGCGGGGCAAAAAGGTAGAGATTGGCGAAAGAGA570.23816487694814692No Hit
ATTGCGCAAAGCCGGGATGATTATCTGCTGACCAAAAGTGCCGAGGAATA560.23398654577361802No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACC560.23398654577361802No Hit
ATTGCGCAATGAATGACACGGGGAAAATAAAACGGGAACAAGAAGGGATT560.23398654577361802No Hit
ATTGCGCAATGAAAAACGCGGGGAACTGAGAGAGGGAAAGACAAAAAAAA560.23398654577361802No Hit
ATTGCGCAATGGGGGGAGTGGAGAAAACGCAGAGGAAAGATAGAAAAGAA560.23398654577361802No Hit
ATTGCGCAATGCGAGGGTGGGGGTGAGTGTAGCTGGGGAGAACAATAATA560.23398654577361802No Hit
ATTGCGCAAATGGGGCGGGGGGGTCAAAATACTCAAACAAGAATAAATCA550.22980821459908912No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAT550.22980821459908912No Hit
ATTGCGCAATGTTGTGGAGGGATGGGGTAAGAAAAGACGTTTAACTAGTT540.22562988342456022No Hit
ATTGCGCAATGGGTGAGCGGGGGTGGTGTTAATGGGGTGGAGGAGATAGG540.22562988342456022No Hit
ATTGCGCAATGTAGGTGGAGGGAAAAAGTTAAAGGTGTAGAAATTTAAAA540.22562988342456022No Hit
ATTGCGCAATGGACGGAGGGGGGAACGTGGTGATTAGCATCAAAAGGAAA530.22145155225003132No Hit
ATTGCGCAATGCACACGCCGGGGACCTTAGATGTGTGGGCGAGGGCGCTT530.22145155225003132No Hit
ATTGCGCAATGAGGAGAGAGGGAAAAGAGCTGAAGGCGCAAAACTTGGAA520.21727322107550243No Hit
ATTGCGCAATGGTTTCCACGGGGGGAGGGGGCGAATTGGTAAAAGAATGA520.21727322107550243No Hit
ATTGCGCAATGCTTGGTTTGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC520.21727322107550243No Hit
ATTGCGCAATGCCATGCCGGGGACGCGAAAAAGAAGCAGCGCAAAATAAA520.21727322107550243No Hit
ATTGCGCAATGCCAGAACAGGGGCTTAAAGAGGAGTACCTATGATTCTTT520.21727322107550243No Hit
ATTGCGCAATGCGTATATAGGGATAGAAAAAAATCCGGAAAGCTCTAGAG510.21309488990097358No Hit
ATTGCGCAATGCCAAGACGGGGGGGAACAGAGAACATCCAAGAGTCGAGA510.21309488990097358No Hit
ATTGCGCAATGGGGGCGAGGGGCGGAGTTGGTATACAGACAAGAAACCCA500.20891655872644468No Hit
ATTGCGCGTGGACCGACGGGGGTTTCGAGCTAGTAAAAGTACGGAATCAA500.20891655872644468No Hit
ATTGCGCAATGGGGGTGCGGGGGGAGAATGTTTTGGAGCGTGTAAGGTAG500.20891655872644468No Hit
ATTGCGCAATGTGAGGAACGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC480.2005598963773869No Hit
ATTGCGCAATGGGGGAGAGGGGAGGTGGAGGGGGTGTCAGGGACACGAAA470.196381565202858No Hit
ATTGCGCAATGGGGCAGGGGGGAAAGAGGCAAGCAATGCGACCCTACGAA470.196381565202858No Hit
ATTGCGCAATGGTCGGTAAGGGAGAGGGAAAAACAAGGACAAGGCACCCG470.196381565202858No Hit
ATTGCGCAATGAGTCGGAGGGGGAGTAGAGAAAGTAGGCCGAAGGTAGGA460.1922032340283291No Hit
ATTGCGCAATGGGATTAGGGGGAAGGATGAAAGAGAGAAACATATACAAA460.1922032340283291No Hit
ATTGCGCAATGGACTGCTGGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC460.1922032340283291No Hit
ATTGCGCAATGATTGTCCCGGGGTCCCAGACCACGCTGGAAAGGCAAGAG450.1880249028538002No Hit
ATTGCGCAATGTCGGTTTGGGGGTGGAGTTTGGAGGTGAAGGGGTGTTAA450.1880249028538002No Hit
ATTGCGCAATGCTTCAAGGGGGGAGGGGAGATTAAAGTGCAGGGGAAGGT440.1838465716792713No Hit
ATTGCGCAATGGGTGGCTGGGGGGGTACAGAGGAGCCGCAGGACGGAAGG440.1838465716792713No Hit
ATTGCGCAATGTGACGCGGGGGAGGGGAGCTTTCGTAGGGATTAGGAGAA440.1838465716792713No Hit
ATTGCGCAATGCAGGTGGGGGGAGGAGAAAGAGAATAGAAGGGGAGGGGT430.1796682405047424No Hit
ATTGCGCAATGCTAGTCGGGGGGGATTGTTGCATAATAAGAGAGCCGGAA430.1796682405047424No Hit
ATTGCGCAATGTGAGAGAGGGGGTTGATTGCGGAGGGGCGAGGGAAACTT430.1796682405047424No Hit
ATTGCGCAATGAGACGAGGGGGAGGTCATACAAAAAAAAGAGTACCAATA420.17548990933021352No Hit
ATTGCGCAATGTGGGTAGTGGGGGTGTATTAGGGTTAATAATGAGGAAAA420.17548990933021352No Hit
ATTGCGCAATGGAAGTTGGGGGAAAGAGAAATCCGTATCGGTACGACTCA420.17548990933021352No Hit
ATTGCGCAATGGTATGACTGGGGGGAAGTGTGAGGTGAGCAGCCAAACAG420.17548990933021352No Hit
ATTGCGCGTGGGTCGGGGAAGGGATGATATTCTAAAAGGAGAGAGGGGAG410.17131157815568462No Hit
ATTGCGCAATGGTGGAGAGGGGGAAGGAAGGTATAAGAGGGGAAGGGAGG410.17131157815568462No Hit
ATTGCGCAATGGAAGTAGAGGGAGGCGATAGGAGCAAAAACACGGGGAGA410.17131157815568462No Hit
ATTGCGCAATGAAGTAGACGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC400.16713324698115573No Hit
ATTGCGCAATGGACAGGAGGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC400.16713324698115573No Hit
ATTGCGCAATGGGAGGGCGGGGATAGAAGGAAGAATGGTTGGTAAAGAAA400.16713324698115573No Hit
ATTGCGCAATGTAATACACGGGGTGGCGACGGTAAGGCGTATGGGCTGCA390.16295491580662683No Hit
ATTGCGCAATGGAGGGATGGGGATAATGGAGTAGTGAGAAACAAGAGTAG390.16295491580662683No Hit
ATTGCGCAATGAGGGGGGTGGGGAGGAAGGAAAAGGTGGGAGGAAAAGAC390.16295491580662683No Hit
ATTGCGCAATGGGGAACAGGGGGGGCAAGGGCAAGGACAGAGGGAGAAAA390.16295491580662683No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT380.15877658463209793No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC380.15877658463209793No Hit
ATTGCGCAATGTAGGGGAGGGGAGAGTGGGAGAGTTTATGTGGCGAAATT370.15459825345756906No Hit
ATTGCGCAATGAGGTGGGGGGGAGTAAAGAAGAAGAGAGGAGCGAGTGCA360.15041992228304016No Hit
ATTGCGCAATGCTGGTGGAGGGAAAGGAGGGGCACTCGGATCAAAGAGGA360.15041992228304016No Hit
ATTGCGCAATGTGCCCTTAGGGGGGGGCCCATAGCTCAGTTGGTAGAGCA360.15041992228304016No Hit
ATTGCGCAATGGAGGGGCTGGGTGAGATATAGTTAAGGGAGAGCAGCACG360.15041992228304016No Hit
ATTGCGCAATGAGGAGTACGGGGAAGGACTAGAAGACGACAGAGGCTTTG360.15041992228304016No Hit
ATTGCGCAATGGGTGGGTGGGGAACGCCAATGCAGAAGAAGGTGAGCCGA350.14624159110851126No Hit
ATTGCGCAATGATGTGGGGGGGTAGAGAGGGAGTTATAACGGGAGTGTTG350.14624159110851126No Hit
ATTGCGCAATGAATGGGGGGGGATAGAATGGTTGGCGAAAAAGAAGATAG350.14624159110851126No Hit
ATTGCGCAATGCGAGAGAGGGGGAGATAAGCTACAAGAGAAGGAAAGGAA340.14206325993398236No Hit
ATTGCGCAATGGAACGTGGGGGAGGGGAGCTTTCGTAGGGATTAGGAGAA340.14206325993398236No Hit
ATTGCGCAATGAAGGATGGGGGAGGTGAGAATATGTAATATCAGTTTATA340.14206325993398236No Hit
ATTGCGCAATGGGGAGCTGGGGATTGTAAGGATTGAGGAAAGGTGTAAAG340.14206325993398236No Hit
ATTGCGCAATGAATACAGCGGGGAGAAGGGATAGCAGATAAGCTGCAAAA330.13788492875945346No Hit
ATTGCGCAATGAGGGCCGGGGGAGCTTGGGCTAAATGGAAGAGTTGAAAG330.13788492875945346No Hit
ATTGCGCAATGACTTCACAGGGGGAGATGTGGCCGAGTGGTCGAAGGCAC330.13788492875945346No Hit
ATTGCGCAATGGGCAGGGGGGGGGAAGAAGATGAGAGAGAGGGATGACGC330.13788492875945346No Hit
ATTGCGCAATGTCGGCACCGGGGATAAGGTCCACAGGGAGAGACCGAAAT330.13788492875945346No Hit
ATTGCGCAATGGCAGGGAAGGGCCTACGAAATTGCAATCACGTGAAAAAA320.13370659758492456No Hit
ATTGCGCAATGGAGGGGAGGGGAGAGTGGGAGAGTTTATGTGGCGAAATT320.13370659758492456No Hit
ATTGCGCAATGATAAACACGGGGGGGGATCATCAATGGGCGGTCACGGGT310.1295282664103957No Hit
ATTGCGCAATGGGGACGGGGGGGGATAGAAGAGGAAGAAGGGATCAGAAA310.1295282664103957No Hit
ATTGCGCAATGTGCGAACGGGGGTAGGCCGACGAGGGCCAAAACACAGAT310.1295282664103957No Hit
ATTGCGCAATGGGGGGTAGGGGGAGTGGAGGGAGAATAAGAAGATAAAGG310.1295282664103957No Hit
ATTGCGCAATGATCAACTTGGGGAGGGAGGGGAGCCATATACAGACATGA310.1295282664103957No Hit
ATTGCGCAATGTTGGGTCGGGGGAGTGGGGAAGGTTTAGATAGTGATAAA310.1295282664103957No Hit
ATTGCGCAATGGGAGACCCGGGTACTAAGTAGACCTTTCTTAGTGTATGC310.1295282664103957No Hit
ATTGCGCAATGGACGAGACGGGCGAGAGGAAAAAGGAGTAGGCTCAGCCA300.1253499352358668No Hit
ATTGCGCAATGCGTGGGGGGGGAAACGATGATGGAGAAGAGTGGATAAAA300.1253499352358668No Hit
ATTGCGCAATGTTCATGCCGGGGTTGTAAGATAAGGGGGAGAGGAGGAAG300.1253499352358668No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG300.1253499352358668No Hit
ATTGCGCAATGCTCTCCTCGGGCATTAGGTTCACTTTTCTTGTTGTCCTC300.1253499352358668No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAC290.12117160406133791No Hit
ATTGCGCAATGACAGTGACGGGCGGGCCGTGGCGCAGCCTGGTTAGCGCG290.12117160406133791No Hit
ATTGCGCAATGGAGAGGGGGGGAGAGAGAGTGGATGAAAGTGGGGTTAGG290.12117160406133791No Hit
ATTGCGCAATGGCAGGGGGGGGTGTGAAAAAAATGAGAAGGGAGAGGAGA290.12117160406133791No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAGCG280.11699327288680901No Hit
ATTGCGCAATGAGAAGATAGGGGACGGGAGTGGAGGTATAGAATATGCTT280.11699327288680901No Hit
ATTGCGCAATGGGGGGCGGGGGAGAAGTAATGATGAAGATCAAATAGGTA280.11699327288680901No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC280.11699327288680901No Hit
ATTGCGCAATGCCAACCAAGGGGAAGAGAGTTATGCACCCCGCTGGAACA280.11699327288680901No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT270.11281494171228011No Hit
ATTGCGCAATGTGTTTAACGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC270.11281494171228011No Hit
ATTGCGCAATGTACAGTCCGGGGTAGGGAGGAGGGAAGATGGCTGGGAGG270.11281494171228011No Hit
ATTGCGCAATGGACCATATGATAAGGCGAGCAACTCGGATGTGCTAATGA270.11281494171228011No Hit
ATTGCGCAATGCACGACACGGGGAGGGACGCCAGAGCTGAGGAGAAGGAA270.11281494171228011No Hit
ATTGCGCAATGGTGAGGGTGGGAAAATAATAATTGGTAGGAGGAATAGAA270.11281494171228011No Hit
ATTGCGCAATGGGGGAGTGGGGACATAAAAATATGCAAACAAATGGAACT260.10863661053775121No Hit
ATTGCGCAATGGGGTTAGAGGGGACACAAAAGCGCGAAAATACGATAGCC260.10863661053775121No Hit
ATTGCGCAATGACTGGGACGGGGCCGGGGCGAAAGAGACGAGATTAAGGG260.10863661053775121No Hit
ATTGCGCAATGGGGCTGGGGGGGAAAACGATAGATAAGGGGGGAGCGTAA260.10863661053775121No Hit
ATTGCGCAATGGGGAAGGGGGGAAAATTGTAAAGAGGTAAGAAGAGGCGA260.10863661053775121No Hit
ATTGCGCAATGGTGTCACGGGGCTTCCATCTTCACGGTAGCTTGATGTGG250.10445827936322234No Hit
ATTGCGCAATGAGAGGGGGGGGAACGTATAGGCGTGAATAATGAATTCTA250.10445827936322234No Hit
ATTGCGCAATGGGGGAGAGGGGAGAGACTACAGACATCGGAGGAAAAGAA250.10445827936322234No Hit
ATTGCGCAATGGGCCTAGGGGGGAGGGCGAGCAAAACGAGGGAAACAGAC250.10445827936322234No Hit
ATTGCGCAATGTACAATACGGGGGGGGGGAGGGGGTAAGAAGGAAGTAGG240.10027994818869344No Hit
ATTGCGCAATGTGAATGTGGGGGGGCCCATAGCTCAGTTGGTAGAGCAAC240.10027994818869344No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)