FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13403
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5103.8051182571066176No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCG4793.5738267552040592No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCT3442.566589569499366No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3122.3278370514064015No Hit
ATTGCGCAATGTACTGGGAGGGGGCTTCTTCCGTCGGTGGTTTCTTCCTT2171.619040513317914No Hit
ATTGCGCAATGATGTGACCGGGGGCGCAGAGAATTGGGGGAAGCGACTGT2061.5369693352234575No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1110.8281727971349697No Hit
ATTGCGCAATGTGGGGCAGGGATAGCCCTGTAGGCGAAAACAGTATGAAA1040.7759456838021339No Hit
ATTGCGCAATGGGATTACCGGGGTATCTAATCCTGTTCGCTCCCCATGCT930.6938745057076774No Hit
ATTGCGCAATGGTATCGTGGGGGAAAGGTGAAAAGCACCCCGACGAGGGG910.6789524733268671No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG780.5819592628516004No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAAT760.5670372304707901No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCAC740.5521151980899798No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC720.5371931657091696No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT540.4028948742818772No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT490.36558979332985153No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT480.35812877713944635No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT480.35812877713944635No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCG470.3506677609490413No Hit
ATTGCGCAATGGTGATCGGGGGGGAAAGGTGAAAAGCACCCCGACGAGGG430.32082369618742074No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC420.3133626799970156No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC400.2984406476162053No Hit
ATTGCGCAATGTTGATGGGGGGGGGAAGCCCGGGGGCTCCTTGGATAACT380.28351861523539507No Hit
ATTGCGCAATGGGCTTTCTGGGCTCGGACCTAGGTCGCGGCGACATGGCC340.2536745504737746No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC340.2536745504737746No Hit
ATTGCGCAATGTTAGGAGGGGGGACTCACGGGAAGTTAAACAGCCTCGTC320.23875251809296424No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT320.23875251809296424No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG320.23875251809296424No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT310.23129150190255915No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG300.223830485712154No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC290.21636946952174885No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA280.20890845333134375No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG250.18652540476012833No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC240.17906438856972318No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTC210.1566813399985078No Hit
ATTGCGCAATGATATTACCGGGAGGGCATCGTAGAGGGTGAAAATCCCGT210.1566813399985078No Hit
ATTGCGCAATGAACGCCCAGGGGGGTGCAAAAACTCCTCCTCGAGGACCA200.14922032380810266No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT200.14922032380810266No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG200.14922032380810266No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG200.14922032380810266No Hit
ATTGCGCAATGTTGACCCTGGGGTGGTGTGTGAGGTGTGGTGATGCCGAG200.14922032380810266No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC190.14175930761769753No Hit
ATTGCGCAATGTATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCT190.14175930761769753No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG190.14175930761769753No Hit
AGCCTAGTGCAGTGACTCACACCTGTAATCCCAGCACTTTGAGAGGCTGA190.14175930761769753No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT180.1342982914272924No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT170.1268372752368873No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCGCG160.11937625904648212No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATGG160.11937625904648212No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT160.11937625904648212No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCA160.11937625904648212No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT160.11937625904648212No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACACTCG150.111915242856077No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCT150.111915242856077No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCTCG140.10445422666567188No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT140.10445422666567188No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)