FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007822137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9659
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4214.358629257687132No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG3183.2922662801532248No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2772.867791696863029No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCT2182.2569624184698207No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1061.0974220933844083No Hit
ATTGCGCAATGGCAAGAAGATTACGCAGGAGCGCAAGGTACTCGAGGTCC790.8178900507298892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG650.6729475100942126No Hit
ATTGCGCAATGAGTCAGCTGGGGAGGGAAGGATCCGTTTTGGCGGGCGGT630.6522414328605446No Hit
ATTGCGCAATGATCGCCGTGGGGAGTCATGTCAACACAGCGTGTTGCTAA570.5901232011595403No Hit
ATTGCGCAATGATTACCCGGGGGTGGATGCCTTGGCACTAGAAGCCGAAG540.5590640853090382No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTAT540.5590640853090382No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAT510.528004969458536No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC470.4865928149911999No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT450.4658867377575318No Hit
ATTGCGCAATGCTTACCGTGGGGTACTTTGGAGTGGGTGGCGGCGTCGAC440.45553369914069786No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG290.30023811988818716No Hit
ATTGCGCAATGAAAGCGGCGGGGGGTCAAGTGAATAAGTGCATATGGTGG250.258825965420851No Hit
ATTGCGCAATGTTACGGTCGGGGAAGCGAATTCAGAGAGGCCCAGTAAGA230.2381198881871829No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT220.22776684957034893No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG210.21741381095351486No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT200.20706077233668083No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATG190.19670773371984676No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT190.19670773371984676No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT180.18635469510301272No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG170.1760016564861787No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC160.16564861786934465No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG160.16564861786934465No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC150.1552955792525106No Hit
ATTGCGCAATGGATCGGCAGGGGGCCGGGGGGCGGGCGCCGGCGGCTTTG150.1552955792525106No Hit
ATTGCGCAATGCTCGACCCGGGCTACGGGAGGCAGCAGTGGGGAATATTG140.14494254063567658No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTCTGATCG140.14494254063567658No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC140.14494254063567658No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT130.13458950201884254No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT130.13458950201884254No Hit
ATTGCGCAATGAGTCAGCTGGGGAGGGACGGATCCGTTTTGGCGGGCGGT120.12423646340200849No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTCTGATCT110.11388342478517446No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT110.11388342478517446No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCT100.10353038616834041No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG100.10353038616834041No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA100.10353038616834041No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGGATGATCG100.10353038616834041No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)