FastQCFastQC Report
Tue 7 May 2024
EGAF00007822159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14573
Total Bases2.2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC7905.4209840115281684No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC5934.0691690111850685No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG5033.4515885541755305No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCT3682.525217868661223No Hit
ATTGCGCAATGAGCGTCTGGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA2481.7017772593151719No Hit
ATTGCGCAATGGTGGATGGGGGCTAAGGGTTCCAGGGTCAAGCTAATCTG1981.358677005420984No Hit
ATTGCGCAATGATCTCTCGGGGGGGGCCCGCACAAGCGGCGGAGCATGCG1811.24202291909696No Hit
ATTGCGCAATGATAGCCCTGGGGAACCGTCCATGTTGAGCCGGTGATACT1581.0841968023056336No Hit
ATTGCGCAATGGGAAGTCAGGGGGATCAAGCGACTAAGTGCATACGGTGG1461.0018527413710285No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1310.8989226652027723No Hit
ATTGCGCAATGTGTCTCCGGGGAAGACGGGTGAGAAACCCGTCCGCCGGA1150.789130583956632No Hit
ATTGCGCAATGAACAGCTGGGGAAGTGTGTAAAGGCCCGGGAACGACTAG1110.7616825636450971No Hit
ATTGCGCAATGGACTATACGGGACGAACCATATTGACCAGTGAAGACCTC1020.6999245179441432No Hit
ATTGCGCAATGCTTACGGTGGGGGGAATCTGACTGTCTAATTAAAACATA990.679338502710492No Hit
ATTGCGCAATGTGTCTTGGGGGGTAGAAACCAAGGACAAGAACGACGAAC920.6313044671653057No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTAT830.5695464214643519No Hit
ATTGCGCAATGTACTCGCCGGGAAGTTGTGTAGTGCGATCGGTGGATGCC790.5420984011528168No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG790.5420984011528168No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAT750.5146503808412819No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG510.3499622589720716No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC510.3499622589720716No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT490.33623824881630415No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATG470.32251423866053663No Hit
ATTGCGCAATGAGGTCGCTGGTTCGAGTCCAGTAAGATCCACCACAACAA450.30879022850476906No Hit
ATTGCGCAATGAGACGCATGGGCGGCCGACGACGCCTACTGGGACAAGGC440.30192822342688536No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT440.30192822342688536No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC410.2813422081932341No Hit
ATTGCGCAATGAACGGTTCGGGGTTTCCAAGGGCGCATGGTGGATGCCTT400.2744802031153503No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA380.2607561929595828No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT340.23330817264804776No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA340.23330817264804776No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG290.19899814725862897No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT280.1921361421807452No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA260.17841213202497772No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG250.17155012694709393No Hit
ATTGCGCAATGAGCACAACGGGCGAATAATAAACCAAAATAAGGCAAAAA220.15096411171344268No Hit
ATTGCGCAATGTCACGAGGGGGCGACCTGGACCAAACGAAAAAAGAAAAA210.1441021066355589No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT200.13724010155767516No Hit
ATTGCGCAATGCGGATAGGGGGGGCGCGGTGGCTCACTCCTGGAATCCCA190.1303780964797914No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCGCG190.1303780964797914No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT190.1303780964797914No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAGGGTATGATCG190.1303780964797914No Hit
ATTGCGCAATGTAGCCCACGGGCTTCTCGCCTAACGCTGCCAACATGGTG190.1303780964797914No Hit
ATTGCGCAATGGGAGTTCCGGGGCGTCGAGGACTGGCTCGTGCCGATCGT190.1303780964797914No Hit
ATTGCGCAATGGAGGACTGGGGGGGGCTAATAAAAAAATAGAACAAAAAA180.12351609140190764No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG180.12351609140190764No Hit
ATTGCGCAATGCGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAG180.12351609140190764No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAGCG180.12351609140190764No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC180.12351609140190764No Hit
ATTGCGCAATGTAACGAGAGGGACGGTCACGAGAGTCAGCAACAGGCCCC180.12351609140190764No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT170.11665408632402388No Hit
ATTGCGCAATGGGAGGTGCGGGGTTCGACAAGCAGGTCACCCTGACGATG170.11665408632402388No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC170.11665408632402388No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC150.10293007616825638No Hit
ATTGCGCAATGATGTACCGGGGCTGTAAAATAAACTAACAAAAATAAACA150.10293007616825638No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)