FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6927
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2753.9699725710986No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1572.266493431499928No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG1231.7756604590731917No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG610.8806120975891439No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCT570.822867042009528No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA550.7939945142197199No Hit
ATTGCGCAATGGATGGGTAGGGGGACTTACCGTCTTACCAAACCCAACCA420.606323083585968No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG310.44752418074202394No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACC260.375342861267504No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTG240.34647033347769596No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG220.317597805687888No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAT210.303161541792984No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT200.28872527789808No Hit
ATTGCGCAATGTTTATGCGGGGGGATCAAGCGACTAAGTGCATATGGTGG170.245416486213368No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCT160.23098022231846396No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC130.187671430633752No Hit
ATTGCGCAATGGGTATGACGGGAGGTGGGAGGCTTTGAAGTGGGGACGCC120.17323516673884798No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATGG120.17323516673884798No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC120.17323516673884798No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT120.17323516673884798No Hit
ATTGCGCAATGGGATCTATGGGCATACAGAACTTGAGCAAGAACATTGTC110.158798902843944No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.14436263894904No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAC100.14436263894904No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC90.12992637505413598No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATGG90.12992637505413598No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAGCG80.11549011115923198No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAGCG80.11549011115923198No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)